Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015815476.1_cds_XP_016498340.1_12387
CDS Infomation

[gene=LOC107817076] [db_xref=GeneID:107817076] [protein=coatomer subunit delta-like] [protein_id=XP_016498340.1] [location=complement(join(125684..125773,126802..126898,126987..127049,127903..128056,128161..128383,129101..129170,129631..129851,129963..130205,130459..130682,132355..132394,132508..132510))] [gbkey=CDS]
Sequence

ATGGTTGTTCTAGCAGCTTCGATAATTTCTAAATCTGGCAAAGCTCTTGTGTCGAGGCAG
TTTGTTGATATGTCTCGTATAAGAATTGAAGGTTATCTTGCAGCTTTCCCCAAATTGGTT
GGTACAGGAAAGCAGCATACATATATTGAGACTGACAATGTGCGATATGTTTATCAACCG
ATAGAGTCTCTGTACTTGCTACTTGTGACCAACAAACAGAGCAACATTCTTGAAGATCTG
GAGACACTGAGGCTGCTGTCTAAACTAGTGCCTGAATATTCTTATTCACTAGATGAGGAA
GGAATTGGCAGTACAGCGTTTGAGCTTATTTTTGCATTTGATGAAGTGATCTCTCTTGGA
CACAAGGAAAATGTTACAGTTACACAAGTCAAGCAGTATTGTGAAATGGAGAGCCATGAG
GAAAGATTGCACAAGTTAGTCTTACAGAACAAGATAAATGAAACTAAGGATGTCATGAAG
CGTAAAGCCAGTGAGATTGACAAAAGCAAGATTGAGAAGAATAGAGGTGAAAAAGGAGGT
TTCATGTCTCTTCAATCCATGGGTTCTGGGAGAATGGATACTGGCTTTGGCAGCGACTCA
GGCATATCTAGCGGAGGAAGTGGTGGTTTTGGTAGTGGTTCTGGATTTGGTCTAAGCCCT
GATGTAGACACATTTTCCACCAAATCCAAGGGTTTGTATTTGTTTCATCCTGTCATTGTG
ATGTGTCTTTATCTTTCTGTGTCTGCGACAATGTCTTGTTGGGCTGATTTTTTCTTGATA
GATTTTCATAGAACTTTTCTCTTCACTGTTCATTCTATACTTTATGTTCAGATTGAAACC
AGTGGTAATCCAGCAAAACTCTTCAAAACACACCCAAACATGAACAAGGAGTTGTTTTCT
AATGAAAATATCCTAGGCCTTAAAGATCCAAATAGGCCATTCCCCACGGGTCAAGGTGGT
GACGGCGTTAGTCTTTTGAGGTGGAGAATGCAAACTGCAGATGAGTCAATTTTGCCTTTG
ACAATTAACTGCTGGCCTTCAGTTTCTGGAAGCGAAACCTATGTGAATATTGAGTATGAA
ACCCCTGCACAGATTGATCTACAAAATGTTGTAATTTCTGTACCCCTTCCAGCTCTCAGG
GAGGCTCCAAATGTACAACAGATAGACGGAGAGTGGAGGTATGACCCCAGAAATTCTGTT
TTGGAGTGGTCTGTACTTCTCATTGACAATTCGAACCGCAGTGGAGCACTAGAATTTGTT
GTTCCGGCAGCCGATCCGTCGGTCTTCTTCCCAATTTCTGCACGCTTTACTGCCTCAAGA
ACTTTCAGTGACCTGAAGGTTGTCAACATTCTGCCTATAAAAGGTGGGCCTACTCCTAAG
CATTCTCAAAGAACACAGCTGGCCACGGAGACTTACCAAGTCGTGTGA

Peptide Sequence

PEP ID

XP_016498340.1
PEP Infomation

PREDICTED: coatomer subunit delta-like [Nicotiana tabacum]
Sequence

MVVLAASIISKSGKALVSRQFVDMSRIRIEGYLAAFPKLVGTGKQHTYIETDNVRYVYQP
IESLYLLLVTNKQSNILEDLETLRLLSKLVPEYSYSLDEEGIGSTAFELIFAFDEVISLG
HKENVTVTQVKQYCEMESHEERLHKLVLQNKINETKDVMKRKASEIDKSKIEKNRGEKGG
FMSLQSMGSGRMDTGFGSDSGISSGGSGGFGSGSGFGLSPDVDTFSTKSKGLYLFHPVIV
MCLYLSVSATMSCWADFFLIDFHRTFLFTVHSILYVQIETSGNPAKLFKTHPNMNKELFS
NENILGLKDPNRPFPTGQGGDGVSLLRWRMQTADESILPLTINCWPSVSGSETYVNIEYE
TPAQIDLQNVVISVPLPALREAPNVQQIDGEWRYDPRNSVLEWSVLLIDNSNRSGALEFV
VPAADPSVFFPISARFTASRTFSDLKVVNILPIKGGPTPKHSQRTQLATETYQVV

Transcript Sequence

Gene sequence data has not been registered.